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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942052.1_cds_XP_016485670.1_76577
CDS Infomation

[gene=LOC107806069] [db_xref=GeneID:107806069] [protein=sphingolipid delta(4)-desaturase DES1-like isoform X1] [protein_id=XP_016485670.1] [location=join(26192..26359,27253..27321,28672..29502)] [gbkey=CDS]
Sequence

ATGGGGTTCGAAGGGGAAAAGAGAGAAGAGGAAGAAGGAGTAGTAATGGCTAATGATTTC
TTTTGGTCATATACTGATGAACCTCATGCTTCTCGTAGAAGGCAAATCCTCTCTCAGTAC
CCTCAGATCAAACAGCTTTTTGGCCCTGACCCTTTTGCCTTTCTCAAGTATCCTTCCTAT
TCTTCCTCTCGAGCCGAGGGTCTTCCGGAAACAGCTTCTCTGCCCTCCAGGGTAGGGATA
TCTGGAGTTGTTTTGCTTCAGCTTTGGACTGCTACCTTCCTTCATGATGCAAGTTGGCTG
AAGATATTGATAGTAGCTTACTTTTTCGGCTCTTTTCTAAACCACAATCTCTTCTTGGCT
ATTCATGAACTAAGTCATAACCTCGCTTTCTCTACTCCAGTCTACAACCGTTGGCTTGGA
ATTTTTGCCAACCTTCCCGTGGGTGTGCCCATGTCTGTTACCTTCCAAAAGTATCACCTC
GAGCACCATCGCTTCCAAGGAGTTGATGGAATCGACATGGACATCCCGAGTCTTGCTGAA
GCCCATGTCGTAAAAAATGTACTTGCAAAATCTATATGGGTCATTCTTCAACTTTTCTTT
TATGCTTTCCGGCCACTTTTTCTTAAACCTAAACCACCTGGCATATGGGAGTTCATTAAT
TTGATTATCCAGCTATCCCTCGATGGAGCTATGGTTTACTTCTGGGGCTGGAAATCACTC
GCTTATCTAATCCTGTCCACCTTTGTTGGGGGCGGGATGCATCCAATGGCTGGTCACTTC
ATCTCCGAGCATTATGTCTTCAATCCTGAGCAGGAGACATACTCCTATTACGGTCCCCTT
AACCTTATGACTTGGAGCGTAGGATACCACAACGAGCACCACGACTTTCCCAGAATTCCC
GGAAGCAAACTCTACAAGGTGAAGGAGATCGCACCAGAATATTATGAAAACTTAGATTCT
TACAAATCTTGGAGCCAGGTCATCTACATGTACATAATGGATCGAACAGTTGGACCTTTC
AGCAGAATGAAGAGAAAGCTGTCAACGAAGGCAAACAAGTCCGAATAG

Peptide Sequence

PEP ID

XP_016485670.1
PEP Infomation

PREDICTED: sphingolipid delta(4)-desaturase DES1-like isoform X1 [Nicotiana tabacum]
Sequence

MGFEGEKREEEEGVVMANDFFWSYTDEPHASRRRQILSQYPQIKQLFGPDPFAFLKYPSY
SSSRAEGLPETASLPSRVGISGVVLLQLWTATFLHDASWLKILIVAYFFGSFLNHNLFLA
IHELSHNLAFSTPVYNRWLGIFANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLAE
AHVVKNVLAKSIWVILQLFFYAFRPLFLKPKPPGIWEFINLIIQLSLDGAMVYFWGWKSL
AYLILSTFVGGGMHPMAGHFISEHYVFNPEQETYSYYGPLNLMTWSVGYHNEHHDFPRIP
GSKLYKVKEIAPEYYENLDSYKSWSQVIYMYIMDRTVGPFSRMKRKLSTKANKSE

Transcript Sequence

Gene sequence data has not been registered.